rs113533199 chr6:27668631 C>T

Sequence
gcgtggtgctaataacgccaaggt[C/T]gcgggttcgatccccgtacgggcc
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -1.76 2.34 1.004.8·10-5 1.17 n/a No Hit
STAG1_HUMAN -2.93 2.48 1.003.4·10-4 1.17 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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