rs113541424 chr1:59921693 C>T
- Sequence
tgcaaacaatcagtagaaacagga[C/T]gtgaagctagacaaccggttagac
- ASB in cell types
- MCF7 WS8 cells 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN GRHL2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.28 | -1.51 | 2.00 | 1.93 | Weak Discordant | |||
| GRHL2_HUMAN | 0.76 | 2.13 | 2.12 | 1.38 | Weak Concordant |
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Motif analysis
