rs113571265 chr12:49347810 A>T
- Sequence
gccatggtgcggtggtgtgggagg[A/T]gctgggcccgggctgggcactgag
- ASB in cell types
- glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 1.16 | 1.49 | n/a | No Hit | |||
| STAG1_HUMAN | 0.07 | 1.05 | 1.12 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood