rs113582410 chr8:12015092 C>T

Sequence
tgcacctggggaagaggaaggacc[C/T]ggcgcgagcggcctctcggcggag
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.38 -0.61 2.2·10-31.00 2.00 n/a No Hit
STAG1_HUMAN 2.34 -2.46 2.7·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Breast_Mammary_Tissue,  Liver,  Muscle_Skeletal,  Pancreas,  Testis,  Thyroid

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