rs113593576 chr9:128879357 A>G
- Sequence
agggaactggcagtgccatccagg[A/G]gtgggatgtggccccaggtctgtt
- ASB in cell types
- thyroid gland
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.89 | 1.17 | 3.91 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Putamen_basal_ganglia, Colon_Sigmoid, Esophagus_Mucosa, Prostate, Thyroid, Whole_Blood