rs113646990 chr7:6953388 C>T
- Sequence
tttcacctaactctcagggagtgc[C/T]tggaagtccccgcaatataggagg
- ASB in cell types
- foreskin keratinocyte GM12892 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.28 | n/a | 2.62 | n/a | No Hit | |||
| STAG1_HUMAN | 2.38 | -1.75 | 2.11 | n/a | n/a |
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