rs113656268 chr15:101252320 T>G

Sequence
cttctcggcccccagactccacgc[T/G]gcgcacgttcctcccgcacgggcc
ASB in cell types
SEM (childhood B acute lymphoblastic leukemia) Kelly (neuroblastoma)
ASB for transcription factors
STAG1_HUMAN CXXC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.09 -0.33 0.021.00 1.06 n/a n/a
CXXC1_HUMAN 2.56 -2.18 0.051.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

Download