rs113708270 chr20:5001472 T>G
- Sequence
ggcgccgcagtgcccgctgcagcc[T/G]ccgcctccggtccccgcgacagcc
- ASB in cell types
- HepG2 (hepatoblastoma) BJ1-hTERT (Human fibroblast telomerase immortalized cell line) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TYY1_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.35 | 0.30 | 1.43 | n/a | No Hit | |||
| EGR1_HUMAN | 1.56 | -0.74 | 1.00 | -0.75 | Weak Concordant |
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Motif analysis
