rs113718708 chr16:1330702 C>T
- Sequence
ggggcagattctgggaggctgtgc[C/T]tgcaatttctagggctgccaccag
- ASB in cell types
- CD34+ hematopoietic stem cells HepG2 (hepatoblastoma) primary B-CLL cells PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1B_HUMAN | 3.43 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Putamen_basal_ganglia, Lung, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid