rs113796462 chr9:114587612 G>C
- Sequence
tgcgcagtagactgcacaggcgca[G/C]tcgaggagctccgctcctttctcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN RBM25_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.92 | 0.79 | 1.00 | n/a | No Hit | |||
| RBM25_HUMAN | 2.41 | -4.57 | 1.50 | n/a | n/a | |||
| NRF1_HUMAN | -2.41 | 1.34 | 1.50 | -0.48 | Weak Discordant |
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Motif analysis
