rs113809928 chr14:51094036 G>T
- Sequence
tgcgcccccactgggatgcgctgt[G/T]cgcaagagacggggaccgtctgct
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.84 | 0.88 | 1.00 | 0.10 | Weak Concordant | |||
| STAG1_HUMAN | -0.92 | 0.94 | 1.00 | n/a | n/a |
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Motif analysis
