rs113816852 chr2:47771447 C>G

Sequence
gctctcatgacagtggcaggaggc[C/G]aagaaaaaacaagcccaattgtgt
ASB in cell types
HEK293 (embryonic kidney) K562 (myelogenous leukemia)
ASB for transcription factors
ZN394_HUMAN ZN600_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN394_HUMAN 2.05 n/a 2.1·10-31.00 2.00 n/a No Hit
ZN600_HUMAN 2.94 -3.02 6.7·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Colon_Transverse,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Ovary,  Pituitary,  Spleen,  Testis,  Thyroid

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