rs113826046 chr8:41512374 G>A

Sequence
tggaggctgagatcgccacctacc[G/A]ccgcctgctggaagacagcgaggg
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.79 -2.86 8.9·10-41.00 1.00 -3.91 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Artery_Tibial Esophagus_Mucosa Lung Skin_Sun_Exposed_Lower_leg

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