rs11637816 chr15:67150217 G>A
- Sequence
cccggttgacccgttgcatgttat[G/A]cagcacttgtgacattgttttatc
- ASB in cell types
- HCT-116 (colon carcinoma) iPS-derived chondrocytes TTC-1240 (Rhabdoid tumor of the kidney) HCT-116-RAD21-mAC
- ASB for transcription factors
- RARA_HUMAN JUND_HUMAN SMCA4_HUMAN NIPBL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 0.85 | 2.13 | 1.00 | n/a | No Hit | |||
| JUND_HUMAN | 2.01 | -0.76 | 1.67 | n/a | No Hit | |||
| SMCA4_HUMAN | 0.01 | 1.53 | 1.62 | n/a | n/a | |||
| NIPBL_HUMAN | 2.39 | -1.23 | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | 2.60 | 0.51 | 1.60 | n/a | n/a |
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