rs11697 chr2:238239934 C>A

Sequence
gctccgccggggacgcggcagggg[C/A]taggagcagcggggacggggagcg
ASB in cell types
K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
ASB for transcription factors
TYY1_HUMAN NELFE_HUMAN GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 2.60 -0.27 3.6·10-91.00 2.00 n/a No Hit
NELFE_HUMAN -2.60 1.59 1.004.5·10-5 1.50 n/a n/a
GCR_HUMAN -0.09 0.96 1.007.5·10-3 1.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Whole_Blood

Download