rs11699393 chr20:38322150 G>A
- Sequence
cggacagcttgtggtaatgtacga[G/A]gacagtgccccctcctgggacact
- ASB in cell types
- T47D (invasive ductal carcinoma) GM18951 (B-cells Lymphoblastoid Cell Lines) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.63 | -0.15 | 1.37 | n/a | No Hit | |||
| RAD21_HUMAN | 1.43 | -0.85 | 1.00 | n/a | n/a |
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