rs11702443 chr21:45885691 G>A

Sequence
gttatggttctttctagttctgtc[G/A]ttccctttcagttgcctgcatctc
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.80 0.30 0.030.96 1.83
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  hdl cholesterol,  microalbuminuria,  refractive error
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Pituitary,  Prostate,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Uterus

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