rs11703890 chr22:50474312 G>A
- Sequence
tctttgcaccccgccaagaccgcc[G/A]ggggcttcagacggagcaccaagg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- TCF21_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 1.80 | n/a | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.08 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Esophagus_Muscularis, Nerve_Tibial, Pancreas, Stomach, Thyroid