rs11704416 chr22:40040969 G>C

Sequence
agcttgctatccccccttccccca[G/C]cttgtgggttattgcagaattgtt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
NOTC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NOTC1_HUMAN 2.07 -4.53 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI prostate cancer
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd aggressive prostate cancer susceptibility fasting insulin homa-ir prostate cancer
GTEx eQTL Whole_Blood

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