rs11707380 chr3:172592371 G>T

Sequence
catgaaccaggggccctgcctggt[G/T]aagagtagcgggtggggattccca
ASB in cell types
MS-1 (Small cell lung carcinoma) Th1-cells
ASB for transcription factors
STAG1_HUMAN MYB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.55 2.00 1.004.5·10-4 1.00 n/a n/a
MYB_HUMAN 2.12 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol triglycerides

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