rs11707681 chr3:39216401 C>T
- Sequence
ctcagagtgctgctcagcagctgt[C/T]cttctttccccattccatctgctc
- ASB in cell types
- CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line) MOLM14 (Adult acute myeloid leukemia) monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN CDK8_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.58 | -0.01 | 2.00 | 2.78 | Discordant | |||
| IKZF2_HUMAN | -0.20 | 1.02 | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | -0.45 | 1.61 | 1.00 | n/a | n/a | |||
| PKNX1_HUMAN | 2.47 | -2.17 | 1.00 | -3.66 | Concordant |
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Motif analysis
