rs11709077 chr3:12295008 G>A
- Sequence
cttagtagccacctcaaaagcaag[G/A]tcataattctgtgaatcagctaat
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.69 | -0.67 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, acute lung injury following major trauma, advanced age-related macular degeneration (geographic atrophy), alzheimers disease, body mass index (bmi), fasting blood glucose, fasting insulin, hdl cholesterol, height, homa-ir, microalbuminuria, neuroticism, total cholesterol change with statins, triglycerides, type 2 diabetes (females), type 2 diabetes (males), type 2 diabetes, combined control dataset
GTEx eQTL Cells_EBV-transformed_lymphocytes, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal