rs117107860 chr12:123232897 C>T

Sequence
gcgccgagtctagaaaaggcgcac[C/T]gcggccgggcagagctcccacacg
ASB in cell types
breast tumor Jurkat (T-cells) 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.55 n/a 5.1·10-51.00 2.00 n/a No Hit
ANDR_HUMAN 2.63 n/a 0.051.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere Cells_Cultured_fibroblasts Heart_Atrial_Appendage

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