rs11711040 chr3:54222532 A>G
- Sequence
ttctttactgagtctgctgagtca[A/G]tgttgacaaataaaactaaacaca
- ASB in cell types
- embryonic stem cell-derived pancreatic cells breast tumor
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.79 | -2.51 | 1.00 | -4.90 | Concordant | |||
| FOXA1_HUMAN | 2.15 | -0.29 | 1.75 | -0.59 | Weak Concordant |
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Motif analysis
