rs11711146 chr3:16467465 C>T
- Sequence
atggccccggctgcctccgctgcc[C/T]gccactcatcctcatctctactgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PKNX1_HUMAN ZN687_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -3.84 | 3.53 | 1.00 | 2.81 | Concordant | |||
| ZN687_HUMAN | -1.61 | 1.87 | 1.00 | n/a | n/a |
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Motif analysis
