rs117112421 chr1:40862199 C>A
- Sequence
ggctcccccggcccgggccagcgg[C/A]tgctctgcggcgggagacccgggc
- ASB in cell types
- breast tumor HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- TYY1_HUMAN ESR1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -2.32 | 2.96 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 3.12 | -5.64 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.09 | 1.44 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3