rs117122604 chr10:132163715 A>G

Sequence
acacccctggtggccatgcctgtc[A/G]atggcaggcactcaggccagactg
ASB in cell types
pancreas prostate gland neural progenitors esophagus squamous epithelium
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.35 0.03 9.6·10-211.00 1.06 2.73 Discordant
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Motif analysis

CTCF_HUMAN Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellum Cells_Cultured_fibroblasts Lung Muscle_Skeletal Testis

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