rs117125549 chr6:79077938 G>A
- Sequence
ctgcgcgggagagagggacgggga[G/A]acacacaggctgagcggtcgggcg
- ASB in cell types
- CD14+ monocytes adult erythroblasts
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.34 | n/a | 1.50 | 2.61 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Heart_Left_Ventricle, Testis, Whole_Blood