rs117144821 chr20:51833659 T>G
- Sequence
agcggcttacacagcacagatgta[T/G]tgtctgaaggctctctgggtgctg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- FOXA1_HUMAN ARI1A_HUMAN GRHL2_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.53 | 1.80 | 3.24 | n/a | No Hit | |||
| ARI1A_HUMAN | -0.04 | 2.51 | 3.00 | n/a | No Hit | |||
| GRHL2_HUMAN | -2.59 | 2.08 | 2.88 | n/a | No Hit | |||
| ESR1_HUMAN | 0.21 | 1.11 | 3.91 | n/a | No Hit |
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