rs11717301 chr3:72348133 C>A
- Sequence
ccaaccccggcctcctgtgagcaa[C/A]aggaaggggaggtcgcgtgacttg
- ASB in cell types
- Th1-cells CD14+ monocytes 22RV1 (prostate carcinoma) GM02630 (Fanconi anemi)
- ASB for transcription factors
- TBX21_HUMAN STAT1_HUMAN ANDR_HUMAN GATA2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 3.39 | -3.73 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.55 | -0.03 | 2.00 | 0.62 | Weak Discordant | |||
| ANDR_HUMAN | 2.53 | n/a | 2.00 | n/a | No Hit | |||
| GATA2_HUMAN | 1.39 | -0.39 | 1.25 | n/a | No Hit |
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Motif analysis
