rs117175016 chr15:44393836 T>C
- Sequence
ctcctgagtagctgagattacagg[T/C]gcatgccacaacacccagctagtt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFAC3_HUMAN KDM1A_HUMAN HDAC1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC3_HUMAN | n/a | 3.34 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | n/a | 2.83 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -1.32 | 3.83 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | n/a | 3.57 | 2.00 | n/a | n/a | |||
| CEBPB_HUMAN | n/a | 2.79 | 2.00 | n/a | No Hit |
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Motif analysis
