rs11718183 chr3:188036426 G>T
- Sequence
catggcatctggccctcaggcaca[G/T]tttgttctcttttttattcagcac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ZR-75-1 (invasive ductal carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) LY-2 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.87 | 0.45 | 1.92 | n/a | No Hit | |||
| MEF2B_HUMAN | -0.16 | 2.73 | 2.00 | n/a | No Hit |
Items per page:
1 – 2 of 2