rs11720848 chr3:53749670 G>A
- Sequence
gtttcccgatacatatgagacttt[G/A]taattatgaaatccatcgccagac
- ASB in cell types
- CD14+ monocytes MDM(monocyte derived macrophages)
- ASB for transcription factors
- STAT1_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.86 | 0.13 | 3.00 | n/a | No Hit | |||
| TF65_HUMAN | 2.48 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, body mass index (bmi), chronic kidney disease, hdl cholesterol, height, obesity with early age of onset (age >2), refractive error, serum creatinine
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid