rs11722784 chr4:2798927 G>A
- Sequence
agtgcagcctcatgggatgcgtga[G/A]ggtgagggtgtgcccatccagctg
- ASB in cell types
- BEAS-2B (bronchial epithelium) CD14+ monocytes breast tumor HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- GCR_HUMAN STAT1_HUMAN SPI1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.39 | -0.22 | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | 3.35 | n/a | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.16 | 0.46 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.53 | -0.03 | 2.00 | 0.29 | Weak Discordant | |||
| TF65_HUMAN | 2.60 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
