rs11725913 chr4:121656537 G>T
- Sequence
gaagtttttgataactaaaattag[G/T]tgtaagttctaaatcaagtaataa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte
- ASB for transcription factors
- FOXK2_HUMAN IRF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.27 | -2.27 | 1.00 | n/a | No Hit | |||
| IRF5_HUMAN | 1.95 | -1.91 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Colon_Sigmoid, Esophagus_Muscularis, Lung, Nerve_Tibial, Testis, Thyroid