rs117336016 chr12:123712059 T>A
- Sequence
agattccgtttctctctctctctc[T/A]ctcacacacacacacacacacaca
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFIC_HUMAN GCR_HUMAN SPT5H_HUMAN GMEB1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 2.28 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.44 | -0.78 | 1.00 | n/a | No Hit | |||
| SPT5H_HUMAN | n/a | 1.87 | 2.00 | n/a | n/a | |||
| GMEB1_HUMAN | n/a | 3.31 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.42 | 0.33 | 1.50 | n/a | No Hit |
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