rs11733848 chr4:69024873 C>G
- Sequence
ttattattatttttagctttcttg[C/G]attaggttacaatatactcattta
- ASB in cell types
- naive endoderm
- ASB for transcription factors
- CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDX2_HUMAN | -2.39 | 2.73 | 1.00 | -1.70 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Colon_Transverse, Liver, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid