rs117349996 chr6:169619050 C>A
- Sequence
aacacctctcatccaagagtacac[C/A]acaatgattcacaaaatattacaa
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.78 | -0.04 | 1.00 | 0.59 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Colon_Sigmoid, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid