rs11738008 chr5:143825264 G>A
- Sequence
cacgctcccacagcaggggctgat[G/A]acctcaggggctgatctgtgcaag
- ASB in cell types
- A549 (lung carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) erythroid cells THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.87 | 0.90 | 1.53 | 0.04 | Weak Concordant |
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Motif analysis
