rs11740145 chr5:174535720 T>G
- Sequence
tcagaaaaccatgacccggatgct[T/G]atcctattcattgcttgagcctga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GATA3_HUMAN AHR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 3.03 | -0.08 | 3.50 | -2.87 | Concordant | |||
| AHR_HUMAN | 1.84 | n/a | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.25 | 0.13 | 3.00 | n/a | No Hit |
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Motif analysis
