rs11740563 chr5:172887211 G>A

Sequence
tttcccaatcaccaaagaggaacc[G/A]cacaccagcctgtcacccccaagg
ASB in cell types
macrophages BEAS-2B (bronchial epithelium)
ASB for transcription factors
CEBPB_HUMAN GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.41 0.55 1.8·10-70.83 2.33 n/a No Hit
GCR_HUMAN -0.10 1.56 1.004.3·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  total cholesterol,  total cholesterol change with statins

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