rs11741178 chr5:149982 G>A

Sequence
cagttcctcaaaaaagtaaatata[G/A]gattaccatatgatccaacaatac
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.45 -0.42 2.6·10-51.00 2.00 1.23 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP cystatin c in serum,  rheumatoid arthritis,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Stomach

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