rs11742611 chr5:52767845 C>G

Sequence
gatttcttgtaacttgagaacttc[C/G]tctataactgggcctttgtttacc
ASB in cell types
monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.29 -1.22 0.031.00 2.00 -4.50 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  abnormal involuntary movement scale,  colorectal cancer vs. adenoma controls,  cystatin c in serum,  fasting blood glucose,  tardive dyskinesia
GTEx eQTL Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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