rs11742654 chr5:54480581 A>G

Sequence
tgacaaggtttgctaagaggaacc[A/G]ggaagcagaaccagcagcaacacc
ASB for transcription factors
TAF9B_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAF9B_HUMAN 2.94 -5.27 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Visceral_Omentum,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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