rs117435589 chr3:46558724 G>A
- Sequence
gtgttgtagttaccctgctctgcc[G/A]tgcacttcctacaactgcacccac
- ASB in cell types
- MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.28 | 2.63 | 1.25 | n/a | No Hit | |||
| STAG1_HUMAN | -0.40 | 2.51 | 1.50 | n/a | n/a |
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