rs117439736 chr1:33431053 G>A
- Sequence
cccctcagcccgccccctcggctc[G/A]gcgccgcgcaccctgctggctgct
- ASB in cell types
- VCaP (prostate carcinoma) foreskin keratinocyte 22RV1 (prostate carcinoma) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.58 | 1.80 | 1.54 | n/a | No Hit | |||
| ANDR_HUMAN | 2.84 | -5.17 | 2.00 | n/a | No Hit |
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