rs11744312 chr5:173690026 T>G
- Sequence
agccaatagcacgggccccgtccc[T/G]ccccccatgcaaatctttggccag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | n/a | 2.42 | 1.33 | -0.88 | Weak Discordant |
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Motif analysis
