rs11745309 chr5:52943385 A>G

Sequence
tttcagagggccaagtctctgtac[A/G]ggatctttatttgtgggtgtatgc
ASB in cell types
LNCaP C4-2B (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP C4-2B (prostate carcinoma) 3.05 -2.72 9.2·10-51.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP mitral annular calcium,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Whole_Blood

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