rs11745493 chr5:123511928 A>G
- Sequence
ttctccgcccactgcttcatccag[A/G]gaaacactcgtatccacagcctct
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium) monocytes from periferal blood CD14+ monocytes
- ASB for transcription factors
- RFOX2_HUMAN GCR_HUMAN ZBT26_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | n/a | 2.25 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | -0.35 | 1.07 | 2.00 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.02 | -1.73 | 1.00 | -2.81 | Concordant | |||
| SRBP2_HUMAN | 2.16 | n/a | 3.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.74 | -0.79 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 5
Motif analysis
