rs11746700 chr5:116032208 C>T
- Sequence
aactatagttcaaaaatattacat[C/T]actaccctgtgttttggggccact
- ASB in cell types
- HCT-116 (colon carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- TF65_HUMAN RAD21_HUMAN CEBPB_HUMAN SP1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.25 | n/a | 2.50 | n/a | No Hit | |||
| RAD21_HUMAN | 2.15 | -1.31 | 1.00 | n/a | n/a | |||
| CEBPB_HUMAN | 2.02 | -1.63 | 1.00 | -1.01 | Weak Concordant | |||
| SP1_HUMAN | 2.63 | -2.25 | 1.00 | n/a | No Hit |
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Motif analysis
